Funded PhD Opportunity Superbugs in the water - Sources of multiple antibiotic resistance in aquatic environments

This opportunity is now closed.

Subjects: Geography, Environmental Studies and Archaeology and Engineering

Summary

Superbugs as bacteria with resistance against multiple antibiotics have become a frequent phenomenon in health care, often endangering successful outcomes of once routine medical interventions. For decades Enterococci were considered harmless intestinal bacteria.  However, multi-drug resistant enterococcal infections are now a leading cause of medical device-associated infections, e.g. for urinary drainage catheters. While processes of resistance proliferation in care settings are well documented, investigation of potential sources in other technical and natural environments has only just begun (Berendonk et al., 2015). Interactions between these bacteria, aquatic organisms and abiotic particles can promote resistance transfer between bacteria and other forms of resistance acquisition. Within and post water treatment such processes can result in the emergence of new pathogens.

This research will involve interdisciplinary collaboration with our group of researchers from environmental sciences, biomedical sciences and engineering. We have characterised resistance transfer in environmental Enterococcus isolates (Conwell et al., 2017) and have established that zooplankton filter feeders can facilitate resistance transfer by conjugation (Olanrewaju et al. 2019). The PhD research will extend the group’s work on facilitation of resistance transfer through aquatic filter feeders and will explore subsequent effects on the benthic environment. It will study bacterial interactions with solid matrices and monitor the impact of biofilm disruption on transfer and acquisition of antibiotic resistance.

This PhD project will suit students from a quantitative science background, including microbiology, chemistry and environmental sciences. Experience with aquatic environments is an advantage. Students should be able to demonstrate aptitude for designing laboratory and field experiments with microbes and other aquatic organisms and share our enthusiasm to address real-world problems of great environmental and health significance.

References:

Berendonk, T.U., C.M. Manaia, C. Merlin, D. Fatta-Kassinos, E. Cytryn, F. Walsh, H. Bürgmann, H. Sørum, M. Norström, M-N Pons, N. Kreuzinger, P. Huovinen, S. Stefani, T. Schwartz, V. Kisand, F. Baquero & J.L. Martinez 2015. Tackling antibiotic resistance: the environmental framework. Nature Reviews Microbiology 13: 310-317

Conwell, M., V. Daniels, P.J. Naughton, & J.S.G. Dooley 2017. Interspecies transfer of vancomycin, erythromycin and tetracycline resistance among Enterococcus species recovered from agrarian sources. BMC Microbiology 17: 19

Olanrewaju, T.O., M. MacCarron, M., J.S.G. Dooley & J. Arnscheidt (2019) Transfer of antibiotic resistance genes between Enterococcus faecalis strains in filter feeding zooplankton Daphnia magna and Daphnia pulex. Science of the Total Environment 659: 1168-1175

Essential Criteria

  • Upper Second Class Honours (2:1) Degree or equivalent from a UK institution (or overseas award deemed to be equivalent via UK NARIC)
  • A comprehensive and articulate personal statement

Desirable Criteria

If the University receives a large number of applicants for the project, the following desirable criteria may be applied to shortlist applicants for interview.

  • First Class Honours (1st) Degree
  • Masters at 65%
  • Research project completion within taught Masters degree or MRES
  • Experience using research methods or other approaches relevant to the subject domain
  • Work experience relevant to the proposed project
  • Experience of presentation of research findings

Funding

    DFE

    The scholarship will cover tuition fees at the Home rate and a maintenance allowance of £15,009 per annum for three years. EU applicants will only be eligible for the fees component of the studentship (no maintenance award is provided).  For Non EU nationals the candidate must be "settled" in the UK.

Other information

The Doctoral College at Ulster University

Launch of the Doctoral College

Current PhD researchers and an alumnus shared their experiences, career development and the social impact of their work at the launch of the Doctoral College at Ulster University.

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Reviews


Completing the MRes provided me with a lot of different skills, particularly in research methods and lab skills.

Michelle Clements Clements - MRes - Life and Health Sciences

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I would highly recommend Ulster University as you get so much support.  Coleraine is a beautiful town and the people are so friendly. It was a really positive experience.

Carin Cornwall - PhD Environmental Sciences

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Key Dates

Submission Deadline
Monday 18 February 2019
Interview Date
w/c 18 March 2019

Campus

Coleraine campus

Coleraine campus
Our coastal and riverside campus focussing on science and health

Contact Supervisor

Dr Joerg Arnscheidt

Other Supervisors

Apply online

Visit https://www.ulster.ac.uk/applyonline and quote reference number #344850 when applying for this PhD opportunity